In a post to his site Matthieu Napoli shares some recommendations about how to organize the code in your application using a "domain modules" approach. This is an organization method that relates the code based on functionality it relates to rather than the type of object it is.
We recently discussed 2 topics seemingly unrelated with my colleagues at Wizaplace: how to organize code [and] how to organize teams.
Regarding “how to organize teams”, we were discussing Spotify’s Feature teams. In a “classic” organization, teams are usually formed by grouping people based on their job title. [...] But in a “feature team” organization, teams are organized… by features. [...] The pros of this kind of organization are numerous and I do not intend to go over them here. But what does this have to do with code organization?
He starts with the "classic" code structure - organized by each item's type (ex: Entity, Service, etc). He then suggests reorganizing it move by what it does in the application, namely which module it belongs in best. He briefly touches on dependencies, "agile design" and the differences between a normal "product" and a "product" in e-commerce. He then applies these ideas and shares a domain organized directory structure, trying to reduce the overall complexity of the structure and the overall cohesion of the codebase.